Peptide Utility Search Server
This application aims on retrieving the peptide sequences from many available databases present online and then building a peptide utility search application. The platform provides the users with two options either to find in homologous sequence or an identical match. This application can be used to search the sequence from 0.4 million database entries present in both online and offline mode which can be further used to study various kind of interactions and designing of peptides. Finally, it will open up avenues for peptide design relevant in pharmacological interventions.
These are the databases from which the PDBs are fetched.
| List of Databanks | Content | Location |
|---|---|---|
| AVPdb | Database of antiviral peptides (experimentally validated) against viruses. | http://crdd.osdd.net/servers/avpdb |
| BaAMPs | Database of biofilm active antimicrobial peptides. | http://www.baamps.it/ |
| BactPepDB | Database of predicted peptides from prokaryotic genomes. | http://bactpepdb.rpbs.univ-paris-diderot.fr/cgi-bin/home.pl |
| CancerPPD | Database of anticancer peptides and proteins. | http://crdd.osdd.net/raghava/cancerppd/ |
| Cell-Penetrating peptides (CPP) | CPP site - Database of cell penetrating peptides which are manually curated. | http://crdd.osdd.net/raghava/cppsite/ |
| DADP | Database of anuran defense peptides. | http://split4.pmfst.hr/dadp/ |
| DBAASP | Database for antimicrobial peptide and structure of peptides. | https://dbaasp.org/ |
| PEPlife | Database of half-life of peptides. | http://crdd.osdd.net/raghava/peplife |
| PeptideDB | Database for bioactive peptides. | http://www.peptides.be/index.php?p=home |
| Propepper | Database for food disorders related to wheat. | https://propepper.net |
| plantPepDB | Database of phytopeptides. | http://14.139.61.8/PlantPepDB/index.php |
| RCSB PDB | Database for various biomolecules. | https://www.rcsb.org |
| SATpdb | Database of therapeutic peptides which are structurally annotated. | http://crdd.osdd.net/raghava/satpdb/links.php |
| TopicalPdb | Database for topically delivered peptides. | http://crdd.osdd.net/raghava/topicalpdb/ |
| TumorHoPe | Database for tumor homing peptides. | http://crdd.osdd.net/raghava/tumorhope/ |
| YADAMP | Yet another database of antimicrobial peptides. | http://yadamp.unisa.it/ |